SRR6576769_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576769_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	137837
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	320	0.23215827390323354	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	200	0.14509892118952095	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	199	0.14437342658357336	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	197	0.14292243737167815	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	163	0.11825562076945959	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	158	0.11462814773972156	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	155	0.11245166392187873	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	146	0.10592221246835029	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	142	0.10302023404455989	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTAAA	20	0.002159063	70.49891	5
GCAAACG	30	1.3621025E-4	62.71121	1
TGTTCTA	25	0.0052116117	56.440083	2
CCGCTAA	25	0.0052266144	56.399124	4
GTATCAA	575	0.0	43.352528	1
TTAGGGC	55	5.2593103E-5	42.726616	3
TATTAGG	45	0.0010073181	41.80747	2
AACGCAG	695	0.0	37.19367	6
TAGGGCT	65	1.4071733E-4	36.15329	4
CAACGCA	715	0.0	35.495953	5
TCAACGC	720	0.0	35.249454	4
ATCAACG	730	0.0	34.766586	3
GGCTATT	55	0.0027089613	34.18129	7
ACGCAGA	760	0.0	34.012634	7
CGCAGAG	775	0.0	33.354324	8
TATCAAC	770	0.0	32.373646	2
GATCACG	30	0.004155859	31.332851	22-23
GAATAAC	60	0.0041487147	31.332851	9
GGTACCT	90	2.5777954E-5	31.33285	8
ACATGGG	950	0.0	31.167942	3