SRR6576774_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576774_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	596535
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1184	0.1984795527504673	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1143	0.1916065276974528	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	877	0.14701568223155387	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	774	0.12974930222032235	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	701	0.11751196493080876	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	699	0.11717669541602756	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	628	0.10527462764129514	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	623	0.10443645385434215	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	623	0.10443645385434215	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	610	0.1022572020082644	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1430	0.0	57.68946	1
ATCAACG	2105	0.0	38.628906	3
TCAACGC	2180	0.0	37.946747	4
AACGCAG	2240	0.0	36.930317	6
CAACGCA	2255	0.0	36.893097	5
GTACATG	3140	0.0	36.331238	1
GGTATCA	605	0.0	35.84239	1
TACATGG	3220	0.0	35.47062	2
ACATGGG	3210	0.0	35.14185	3
TATCAAC	2595	0.0	31.878193	2
ACGCAGA	2675	0.0	30.922234	7
CGCAGAG	2675	0.0	30.746538	8
CATGGGA	1395	0.0	29.650146	4
ATCCGCG	65	0.006152925	28.92202	7
GCAGAGT	3065	0.0	26.987595	9
CATGGGG	1465	0.0	26.950079	4
CATGGGT	825	0.0	26.207298	4
ATGGGTA	560	0.0	26.019087	5
GGGTACC	470	0.0	24.999084	7
AGAGTAC	2790	0.0	24.678308	10-11