SRR6576788_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576788_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	751435
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2561	0.3408145747802538	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1827	0.24313480207868945	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1311	0.1744661880269085	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	963	0.1281547971547772	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	917	0.12203317652225408	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	867	0.11537924105212027	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	867	0.11537924105212027	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	756	0.1006075043084232	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	375	61.50719	1
GTATCAA	1425	55.825535	1
TCAACGC	1740	44.829906	4
ATCAACG	1775	43.945934	3
CAACGCA	1825	42.741936	5
AACGCAG	1840	42.393497	6
TATCAAC	2125	37.150043	2
ACGCAGA	2255	34.799973	7
CTTAGGT	530	34.577827	3
GTCTTAG	595	34.018295	1
CGCAGAG	2310	33.79272	8
TACATGG	2985	33.373405	2
GTACATG	3045	33.08168	1
ACATGGG	3105	31.629599	3
GCAGAGT	2470	31.603716	9
TTAGGTA	570	31.326923	4
TAGGTAT	575	31.054514	5
AGGTATA	575	30.23729	6
GGTATAG	605	29.514622	7
CATGGGG	1890	29.337912	4