SRR6576793_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576793_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	923484
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5759	0.6236166517232568	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2992	0.32399045354332073	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2278	0.24667454985684645	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	2065	0.22360972144617558	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1963	0.21256459234810782	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	1576	0.17065807312308603	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1478	0.16004608634258957	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1327	0.1436949638542736	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1260	0.13643983003495458	No Hit
GTATGGATAGGAAGGGATGATGGTGGAGTCCTGGTGAGAAGTCTCCACTC	1245	0.13481554634406226	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1199	0.12983440969199248	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	1095	0.1185727094351391	No Hit
GGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAA	1079	0.11684014016485396	No Hit
GAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATTTAT	1077	0.11662356900606831	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	1067	0.1155407132121401	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1038	0.11240043140974831	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1002	0.10850215055160674	No Hit
ACACTGGAGGCTCAGGCCATTCTTCATTCTCGGGCCTGGAGGCAGCGATT	951	0.10297958600257286	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	605	60.604122	1
GTATCAA	2670	52.112675	1
TCAACGC	3055	44.60274	4
ATCAACG	3115	43.592777	3
CAACGCA	3135	43.464554	5
AACGCAG	3245	42.135975	6
GGTAATC	450	41.765938	8
TATCAAC	3340	40.955235	2
TAGGTAT	995	34.47264	5
CGCAGAG	3975	34.27959	8
ACGCAGA	3990	34.15072	7
AAGGGTA	525	34.009407	5
CTTAGGT	1000	33.83041	3
GTGCAAG	650	32.54334	1
GCAGAGT	4205	32.404606	9
GTCTTAG	1145	31.20118	1
TTAGGTA	1090	31.037073	4
ACCTAAG	1880	31.004644	1
CTAAGAC	1940	31.001522	3
GTACATG	4885	30.600286	1