SRR6576796_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576796_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1202592
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4719	0.39240241079268784	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2898	0.24097948431388203	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2431	0.20214669646896039	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1494	0.1242316596152311	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1395	0.11599944120699289	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1343	0.11167544769963544	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1266	0.10527261115989464	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1248	0.10377584417657858	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1206	0.1002833878821745	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	570	0.0	66.17362	1
GTATCAA	2225	0.0	55.73083	1
TCAACGC	2810	0.0	43.656345	4
ATCAACG	2870	0.0	42.747227	3
CAACGCA	2885	0.0	42.68435	5
AACGCAG	2980	0.0	41.481335	6
CTTAGGT	925	0.0	38.112625	3
GTACTAG	75	7.2842686E-6	37.718964	1
TTAGGTA	940	0.0	37.501324	4
TAGGTAT	940	0.0	37.00131	5
TATCAAC	3405	0.0	36.16875	2
GTCTTAG	1080	0.0	35.798088	1
AGGTATA	1000	0.0	35.721264	6
GGTATAG	1000	0.0	35.718296	7
GTATAGT	1110	0.0	33.872257	8
ACGCAGA	3760	0.0	33.24841	7
TCTTAGG	1225	0.0	32.999832	2
CGCAGAG	3860	0.0	32.387054	8
ACCGTTC	60	0.004162031	31.331835	8
GTACATG	5050	0.0	31.276861	1