SRR6576817_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576817_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1302635
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5114	0.39258886794842757	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3209	0.24634682777600786	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2522	0.1936075723437494	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1721	0.1321168247436926	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1489	0.11430677050747139	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1420	0.10900981472169871	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1400	0.10747446521857619	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1323	0.1015633696315545	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1320	0.10133306720608612	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	600	68.245605	1
GTATCAA	2460	56.632187	1
ATCAACG	2960	46.203403	3
TCAACGC	3000	45.4307	4
CAACGCA	3115	43.60261	5
AACGCAG	3165	42.90884	6
TATCAAC	3620	37.78248	2
TTAAGAC	400	34.073025	3
ACGCAGA	3990	33.6821	7
ACTTAAG	380	33.441586	1
CGCAGAG	4150	32.52046	8
GTACATG	5175	31.468239	1
TAGGTAT	875	31.15248	5
TACATGG	5215	31.003458	2
GTCTTAG	1065	30.493423	1
CTTAGGT	910	29.954306	3
GCAGAGT	4565	29.46104	9
ACATGGG	5395	29.444075	3
AGGTATA	930	28.801464	6
GGATAAT	605	28.784124	1