SRR6576819_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576819_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1321420
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5808	0.43952717531140745	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3615	0.27356934207140804	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2921	0.22105008248702154	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1769	0.1338711386236019	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1722	0.13031435879584083	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1620	0.12259538980793389	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1592	0.12047645714458688	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	1443	0.1092007083289189	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1356	0.10261688183923355	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1342	0.10155741550756006	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1323	0.10011956834314602	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	765	65.85439	1
GTATCAA	2845	53.288815	1
TCAACGC	3240	45.543316	4
ATCAACG	3250	45.403183	3
CAACGCA	3365	43.85151	5
AACGCAG	3495	42.353268	6
TATCAAC	3985	37.618572	2
ACGCAGA	4415	33.421238	7
TAGGTAT	1135	32.709297	5
CTTAGGT	1145	32.423626	3
CGCAGAG	4615	31.99223	8
GTCTTAG	1285	31.51068	1
AGGTATA	1180	31.460718	6
GTACATG	5550	31.21888	1
TACATGG	5610	30.659018	2
TTAGGTA	1260	30.210258	4
GCAGAGT	4990	29.682232	9
ACCTAAG	1800	29.295977	1
ACATGGG	5760	29.04474	3
GGTATAG	1285	28.889997	7