SRR6576851_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576851_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1336050
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5486	0.41061337524793234	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3678	0.27528909846188393	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2932	0.21945286478799444	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1852	0.1386175667078328	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1828	0.13682122675049588	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1754	0.13128251188204035	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1631	0.1220762696006886	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1569	0.11743572471090154	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1519	0.11369334979978295	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	750	64.55137	1
GTATCAA	2855	54.988243	1
TCAACGC	3305	46.061756	4
ATCAACG	3385	44.973152	3
CAACGCA	3495	43.557682	5
AACGCAG	3565	42.70241	6
TATCAAC	3960	38.93213	2
ACGCAGA	4420	34.442104	7
CGCAGAG	4605	33.058437	8
TAGGTAT	1190	32.771633	5
CTTAGGT	1245	32.456078	3
GTACATG	5435	32.431065	1
TACATGG	5560	31.617413	2
TTAGGTA	1325	31.560297	4
GTCTTAG	1365	31.335617	1
AGGTATA	1245	30.946493	6
ACATGGG	5625	30.822708	3
GCAGAGT	5085	30.030277	9
ACCTAAG	1890	28.848665	1
TCTTAGG	1590	28.675047	2