SRR6576857_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576857_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	924834
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3750	0.40547817229902877	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2430	0.26274985564977066	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2270	0.24544945363167875	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1404	0.15181102770875637	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1303	0.14089014893483587	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1253	0.13548377330418215	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1141	0.12337349189151783	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1042	0.11266886814282347	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1025	0.1108307004284012	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	947	0.10239675444458142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	550	61.63367	1
GTATCAA	1965	54.62866	1
TCAACGC	2370	44.813538	4
ATCAACG	2405	44.161366	3
CAACGCA	2455	43.453373	5
AACGCAG	2530	42.348694	6
TAGGTAT	710	40.375748	5
TATCAAC	2675	39.708252	2
CTTAGGT	740	38.103836	3
TTAGGTA	795	36.649975	4
AGGTATA	780	36.14784	6
GTACATG	3850	35.58611	1
ACGCAGA	3015	35.38052	7
GTCTTAG	885	35.111465	1
TACATGG	3890	35.03842	2
GGTATAG	820	34.38453	7
ACATGGG	3965	34.134884	3
CGCAGAG	3130	34.10457	8
GTATAGT	970	32.48135	8
TATAGTA	975	32.314777	9