SRR6576867_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576867_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1320847
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4320	0.3270628619363181	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2610	0.1976004790865255	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2227	0.16860393368800475	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1607	0.1216643562804776	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1502	0.11371491171952543	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1480	0.11204931381151641	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1451	0.10985375293277723	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1388	0.10508408619620592	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1376	0.10417557824638282	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	685	59.71801	1
GTATCAA	2500	53.413982	1
TCAACGC	2965	44.382587	4
ATCAACG	3020	43.885544	3
CAACGCA	3035	43.204086	5
AACGCAG	3140	41.759365	6
TATCAAC	3670	35.873074	2
ACGCAGA	3980	32.945827	7
GTACATG	5350	32.2544	1
TACATGG	5360	31.667887	2
CGCAGAG	4175	31.407042	8
ACATGGG	5480	31.04612	3
GGTAATC	540	29.591331	8
ACCTAAG	1655	28.978697	1
AAGGGTA	555	28.791565	5
GTATAGG	360	28.734047	1
GCAGAGT	4645	28.431509	9
GTCTTAG	1165	27.44477	1
GTGCAAG	750	26.957762	1
TAGGTAT	925	26.92858	5