SRR6576868_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576868_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1271238
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4352	0.3423434478830872	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2796	0.21994307910871133	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2159	0.1698344448482503	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1563	0.12295101310690838	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1475	0.1160286272122136	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1427	0.1122527803605619	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1384	0.10887025088929059	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1369	0.10769029874814944	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1333	0.10485841360941067	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1327	0.10438643275295421	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1299	0.10218385542282406	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1279	0.10061058590130252	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	650	62.200466	1
GTATCAA	2505	51.609962	1
TCAACGC	2930	43.13741	4
ATCAACG	2975	42.48491	3
CAACGCA	2985	42.342583	5
AACGCAG	3080	41.18911	6
TATCAAC	3540	35.9894	2
TAGGTAT	845	35.031055	5
CGCAACG	175	34.903957	5
CTTAGGT	900	33.412334	3
TTAGGTA	940	32.490387	4
ACGCAGA	3920	32.362873	7
CGCAGAG	4135	30.566528	8
GTACATG	4920	30.481346	1
TACATGG	4980	30.114103	2
AGGTATA	970	30.03235	6
GTCTTAG	1095	29.62399	1
ACATGGG	5090	29.44708	3
ACCTAAG	1470	28.782846	1
GCAGAGT	4475	28.349154	9