SRR6576882_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576882_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1315045
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5419	0.41207715325331074	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3423	0.2602952750666327	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2609	0.1983962525997209	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1753	0.13330342307677684	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1748	0.1329232079510587	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1716	0.13048983114646268	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1705	0.1296533578698828	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1614	0.1227334425818128	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1448	0.11011030040797083	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2605	53.401493	1
GGTATCA	780	53.022167	1
TCAACGC	3060	44.37585	4
ATCAACG	3145	43.325905	3
CAACGCA	3220	42.316757	5
AACGCAG	3285	41.479446	6
TATCAAC	3585	38.14813	2
TAGGTAT	950	36.599773	5
TTAGGTA	970	35.845142	4
CTTAGGT	970	35.845142	3
AGGTATA	970	34.876354	6
ACGCAGA	3980	34.236176	7
GTCTTAG	1090	33.19966	1
CGCAGAG	4180	32.59808	8
GGTATAG	1050	32.21911	7
TATAGTA	1220	30.810623	9
GTATAGT	1210	30.676939	8
GCAGAGT	4550	30.050512	9
ACCTAAG	1690	29.19927	1
GTACATG	5070	29.106573	1