SRR6576882_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576882_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1315045
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5595	0.4254607256785889	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3363	0.2557326935580151	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2518	0.19147633731165092	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1702	0.1294252287944519	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1665	0.12661163686413773	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1663	0.12645955081385046	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1545	0.11748647384690258	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	1487	0.11307597838857225	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1410	0.10722066545251303	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1358	0.10326642814504447	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1321	0.1004528362147303	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	555	60.195065	1
GTATCAA	2550	58.8635	1
TCAACGC	2855	50.86114	4
CAACGCA	2925	49.64395	5
ATCAACG	2945	49.466377	3
AACGCAG	3110	46.841957	6
TATCAAC	3700	39.7551	2
ACGCAGA	3820	38.13573	7
CGCAGAG	3900	37.380463	8
TAGGTAT	910	36.148506	5
CTTAGGT	940	34.494904	3
GTCTTAG	1095	34.37727	1
GCAGAGT	4340	33.699097	9
TTAGGTA	1025	32.551292	4
AGGTATA	1025	32.092823	6
ACCTAAG	1695	31.369259	1
CTAAGAC	1800	30.806562	3
GGTATAG	1095	30.041225	7
TCTTAGG	1285	29.98893	2
GTACATG	4960	29.883017	1