SRR6576885_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576885_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1348253
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4223	0.31322014488378663	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2812	0.20856619640379068	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2404	0.1783048137107798	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1544	0.11451856587747254	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1521	0.11281265459820969	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1507	0.11177427381952794	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1461	0.10836245126100219	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1411	0.10465394847999597	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1407	0.10435726825751546	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1366	0.10131629597709035	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	655	62.435703	1
GTATCAA	2635	61.188328	1
TCAACGC	3125	50.383167	4
CAACGCA	3215	48.82656	5
ATCAACG	3235	48.669983	3
AACGCAG	3345	47.069473	6
TATCAAC	3805	41.632294	2
ACGCAGA	3985	39.51001	7
CGCAGAG	4255	37.00291	8
GCAGAGT	4610	34.663197	9
GTACATG	5470	33.600407	1
TACATGG	5570	32.6596	2
ACATGGG	5775	31.332815	3
TTAGGTA	830	30.01155	4
GTGCAAG	740	28.584848	1
GTCTTAG	1060	28.381098	1
TAGGTAT	855	28.034624	5
GTCTTAA	455	27.893784	1
GTAATCA	510	27.6466	9
ACCTAAG	1600	27.322351	1