SRR6576886_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576886_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1299742
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4527	0.34829989336345213	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3077	0.23673929133628058	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2282	0.1755733060869003	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1619	0.12456318253930396	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1521	0.11702322460919168	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1516	0.11663853287806349	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1516	0.11663853287806349	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1465	0.11271467722055609	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1451	0.11163754037339718	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	1355	0.10425145913573618	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1316	0.10125086363293638	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	685	0.0	59.111584	1
GTATCAA	2220	0.0	56.414845	1
TCAACGC	2865	0.0	42.317852	4
ATCAACG	2885	0.0	42.02449	3
CAACGCA	2960	0.0	40.642162	5
AACGCAG	3090	0.0	39.236454	6
TATCAAC	3615	0.0	33.928192	2
GTCTTAG	1035	0.0	33.663254	1
CTTAGGT	955	0.0	33.46063	3
GTACATG	5220	0.0	33.10246	1
TACATGG	5200	0.0	32.89475	2
TAGGTAT	990	0.0	31.803003	5
GCATATA	90	2.5970146E-5	31.328333	2
ACATGGG	5370	0.0	31.153315	3
GGTACCT	725	0.0	31.133833	8
ACGCAGA	3890	0.0	31.046457	7
TTAGGTA	1030	0.0	30.567936	4
CGCAGAG	4060	0.0	29.998745	8
ACCTAAG	1545	0.0	29.864985	1
TCTTAGG	1260	0.0	29.836508	2