SRR6576892_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576892_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1131452
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4078	0.360421829648982	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2809	0.24826506117802613	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2133	0.18851882360011737	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1436	0.1269165638489304	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1298	0.11471984671024488	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1233	0.10897501617390751	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1219	0.10773766805838869	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1200	0.10605840990161315	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1149	0.10155092748079458	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	635	59.376827	1
GTATCAA	2355	55.03545	1
TCAACGC	2745	45.886227	4
ATCAACG	2760	45.46656	3
CAACGCA	2870	44.215218	5
AACGCAG	2960	43.029617	6
TATCAAC	3210	39.6784	2
CTTAGGT	925	36.075016	3
ACGCAGA	3535	36.028862	7
TAGGTAT	955	35.926044	5
GTCTTAG	1065	35.403084	1
AGGTATA	1010	34.435013	6
TTAGGTA	970	34.401432	4
CGCAGAG	3735	34.09961	8
GCAGAGT	3995	31.76272	9
GGTATAG	1105	31.047832	7
GTACATG	4465	30.610981	1
TACATGG	4510	30.116964	2
TCTTAGG	1275	29.858274	2
GTATAGT	1300	29.282784	8