SRR6576894_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576894_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1364797
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5454	0.3996198702078038	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3594	0.2633358660665286	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2837	0.20786974180042891	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1800	0.13188774594316957	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1765	0.1293232619942746	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1645	0.12053074559806332	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1562	0.11444925509068382	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1518	0.111225332412073	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1503	0.11012626786254659	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1488	0.10902720331302017	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1451	0.10631617742418836	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1448	0.10609636451428307	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	780	55.017197	1
GTATCAA	2910	51.37099	1
TCAACGC	3345	44.40094	4
ATCAACG	3355	44.2686	3
CAACGCA	3455	43.25938	5
AACGCAG	3645	41.004436	6
TATCAAC	4080	36.28705	2
ACGCAGA	4535	32.85121	7
CGCAGAG	4710	31.530844	8
GTACATG	5825	31.087584	1
TACATGG	5785	31.035679	2
ACATGGG	6110	29.30792	3
GCAGAGT	5090	29.176872	9
TAGGTAT	1015	28.246527	5
CTTAGGT	1050	27.7526	3
TTAGGTA	1065	27.361717	4
AGGGTAA	500	27.260214	6
GTCTTAG	1195	27.229074	1
GGTAATC	485	27.132246	8
ACCTAAG	1855	26.184542	1