SRR6576895_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576895_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1290457
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5686	0.4406190985054132	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3819	0.2959416702764989	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2888	0.223796685980238	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1892	0.14661472641087614	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1789	0.13863305790119312	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1643	0.1273192365185357	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1634	0.1266218091730294	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1627	0.12607936568208009	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1549	0.12003499535435896	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1540	0.11933756800885267	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1474	0.11422310080847328	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1426	0.11050348829910643	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1413	0.10949609324448625	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	1369	0.10608644844423332	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1352	0.10476908568049924	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1325	0.10267680364398038	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	700	60.42399	1
GTATCAA	2555	54.629906	1
TCAACGC	3020	45.587048	4
ATCAACG	3025	45.356365	3
CAACGCA	3140	43.99451	5
AACGCAG	3270	42.101795	6
TATCAAC	3650	37.854664	2
ACGCAGA	4125	33.375244	7
CGCAGAG	4295	32.05422	8
GTACATG	5350	30.65749	1
TACATGG	5345	30.422388	2
AAGGGTA	530	30.142815	5
ACATGGG	5375	29.897055	3
GCAGAGT	4610	29.863966	9
GGTAATC	490	29.726675	8
ACCAGAT	2125	29.40854	94
ACCTAAG	2070	28.606527	1
CTAAGAC	2160	28.279411	3
GTAATCA	630	27.595732	9
CTTAGGT	1135	27.323029	3