SRR6576910_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576910_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1245127
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4568	0.36687020681424465	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2805	0.2252782246309011	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2301	0.18480042598064292	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1686	0.1354078740562208	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1597	0.12826000881837757	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1494	0.11998776028469384	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1342	0.10778017021556836	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1340	0.10761954403044831	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	635	61.43861	1
GTATCAA	2690	55.74108	1
ATCAACG	3175	45.87547	3
TCAACGC	3200	45.517075	4
CAACGCA	3305	44.07099	5
AACGCAG	3355	43.694286	6
TATCAAC	3650	40.177353	2
ACGCAGA	4110	35.439083	7
TAGGTAT	725	34.99599	5
CGCAGAG	4325	33.677372	8
GCAGAGT	4600	31.66405	9
CTTAGGT	785	30.525522	3
GTACATG	4860	30.465712	1
TTAGGTA	805	30.350794	4
GTCTTAG	935	29.660429	1
TACATGG	5000	29.61148	2
ACCTAAG	1430	29.583088	1
ACATGGG	5090	28.985075	3
CTAAGAC	1615	27.638449	3
GGTATAG	890	27.452124	7