SRR6576926_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576926_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1099412
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3543	0.3222631734054203	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2356	0.2142963693319702	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1741	0.15835737648852297	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1244	0.11315139365406235	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1152	0.1047832841555304	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1151	0.10469232644358985	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1148	0.10441945330776817	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1129	0.10269125678089741	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	665	0.0	62.27233	1
GTATCAA	2025	0.0	52.519127	1
TCAACGC	2405	0.0	43.769753	4
ATCAACG	2415	0.0	43.588505	3
CAACGCA	2490	0.0	42.275597	5
AACGCAG	2580	0.0	40.98302	6
TATCAAC	3035	0.0	35.305065	2
GTATATG	160	6.002665E-11	32.35242	1
ACGCAGA	3305	0.0	31.991339	7
TAGGTAT	725	0.0	30.464985	5
CGCAGAG	3475	0.0	30.449837	8
CTTAGGT	725	0.0	29.816793	3
TTAGGTA	775	0.0	29.712248	4
TACATGG	4195	0.0	29.68758	2
GTCTTAG	925	0.0	29.50668	1
TGCGTTA	40	4.7872218E-4	29.369825	90-91
GTACATG	4280	0.0	29.246368	1
ACTACCG	65	0.0061361203	28.94036	94
GCAGAGT	3700	0.0	28.852364	9
AGGTATA	780	0.0	27.714327	6