SRR6576946_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576946_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	756547
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2925	0.3866250213139435	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1923	0.25418116785870537	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1876	0.24796873161878905	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1244	0.16443129111608398	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1007	0.1331047509275696	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1007	0.1331047509275696	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	924	0.12213385288686623	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	789	0.10428962113391502	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	759	0.10032423629992583	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	445	68.655304	1
GTATCAA	1605	50.955956	1
TCAACGC	1785	44.48624	4
CAACGCA	1845	43.039536	5
ATCAACG	1850	42.92321	3
AACGCAG	1950	40.72202	6
TATCAAC	2230	35.831486	2
GTACATG	3040	33.705727	1
TACATGG	3125	32.488113	2
TAGGTAT	670	32.259697	5
ACGCAGA	2485	31.954908	7
ACCTAAG	1100	31.192553	1
CGCAGAG	2580	30.77827	8
ACATGGG	3260	30.70006	3
AAGGGTA	365	29.608213	5
CTTAGGT	730	29.608213	3
CTAAGAC	1205	29.244987	3
CCTAAGA	1275	28.754457	2
ATTATCC	1280	28.63267	3
GTCTTAG	795	28.378855	1