SRR6576946_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576946_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	756547
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2945	0.3892686112032696	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1968	0.26012924510968916	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1803	0.23831962852274877	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1120	0.1480410338022621	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1029	0.13601269980582834	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	943	0.12464526328172605	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	900	0.11896154501967492	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	848	0.11208821130742704	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	764	0.10098513377225739	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	470	0.0	72.120056	1
GTATCAA	1725	0.0	48.852337	1
ACGGTAA	45	0.0010100533	41.808685	94
ATCAACG	1960	0.0	41.71396	3
TCAACGC	1965	0.0	41.607815	4
CAACGCA	2030	0.0	40.27555	5
AACGCAG	2115	0.0	38.87907	6
TATCAAC	2210	0.0	37.425365	2
GTACATG	2935	0.0	32.56187	1
ACGCAGA	2550	0.0	32.24676	7
TACATGG	2960	0.0	32.229233	2
CGCAGAG	2610	0.0	31.526293	8
ACATGGG	3045	0.0	31.0168	3
GCAGAGT	2825	0.0	29.626265	9
GGATAAT	500	0.0	29.188591	1
CTATTAA	185	3.2196112E-10	27.992544	1
TAATAGT	560	0.0	27.689436	4
CATGGGG	1810	0.0	27.517914	4
CTTAGGT	760	0.0	27.203657	3
GTATTAC	70	0.008762651	26.901928	1