SRR6576953_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576953_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	915995
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5149	0.5621209722760496	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2161	0.23591831833143195	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1707	0.18635472901052955	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1699	0.1854813617978264	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	1657	0.180896183931135	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1590	0.17358173352474632	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1432	0.15633273107385956	No Hit
GACCTATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGC	1217	0.13286098723246306	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1193	0.13024088559435368	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	1184	0.12925834748006268	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	1083	0.1182320864196857	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1051	0.1147386175688732	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1043	0.11386525035617005	No Hit
GTATGGATAGGAAGGGATGATGGTGGAGTCCTGGTGAGAAGTCTCCACTC	1027	0.1121185159307638	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	943	0.10294816019738098	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	929	0.10141976757515052	No Hit
ACTATGTGAGGAGCATGGAATCCTTAGAGAAAATATCATTGACCTATCCA	928	0.10131059667356263	No Hit
GGCCTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAA	918	0.10021888765768372	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	670	72.37248	1
GTATCAA	2810	57.464394	1
ATCAACG	3345	47.20317	3
TCAACGC	3350	47.132717	4
CAACGCA	3450	45.494133	5
AACGCAG	3610	43.477768	6
TATCAAC	3765	42.066883	2
ACCTAAG	1610	37.135468	1
ACGCAGA	4235	37.061333	7
CGCAGAG	4325	36.205177	8
CTAAGAC	1720	35.24433	3
GCAGAGT	4480	35.057507	9
CCTAAGA	1815	33.403233	2
GTACATG	5005	32.168667	1
TAAGACA	2065	32.08685	4
TACATGG	5190	30.969498	2
ACATGGG	5255	30.404243	3
ATGGGGG	845	30.03067	5
AAGGGTA	360	30.022947	5
GTAATCA	480	29.389524	9