SRR6576955_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576955_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1007941
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3741	0.3711526765951578	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2059	0.20427782975392408	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1662	0.1648906037158921	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1185	0.11756640517649347	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1177	0.1167727079263568	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1172	0.1162766471450214	No Hit
ATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATGGCCTGAG	1085	0.10764518954978516	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1011	0.10030348998602101	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	525	68.10215	1
GTATCAA	2000	55.747437	1
TCAACGC	2510	43.06123	4
ATCAACG	2560	42.22019	3
CAACGCA	2640	41.2968	5
AACGCAG	2715	40.329086	6
TATCAAC	3100	35.172375	2
TAGGTAT	720	32.63396	5
ACGCAGA	3355	32.35577	7
GTACATG	4185	31.924892	1
CTTAGGT	755	31.743553	3
GTCTTAG	830	31.740698	1
CGCAGAG	3475	31.25861	8
TACATGG	4260	31.111067	2
TTAGGTA	780	30.726131	4
ACATGGG	4355	29.781958	3
ACCTAAG	1305	29.19988	1
TCTTAGG	1020	28.56715	2
TAAGACA	1530	28.257174	4
GCAGAGT	3845	28.250628	9