SRR6576962_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576962_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1122373
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4166	0.3711778526390068	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2508	0.2234551258806119	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2226	0.1983297887600646	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	1587	0.14139684400818622	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1367	0.1217955171765536	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	1268	0.11297492010231892	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1254	0.11172756294030595	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	1200	0.10691632817254157	No Hit
GGATAATAGTATGCCATTCCCCATTAATCTTTTCTACATTAAAGTTCCTT	1179	0.1050452924295221	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1140	0.10157051176391449	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	1135	0.10112502706319557	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	630	61.919987	1
GTATCAA	2485	58.442047	1
TCAACGC	2995	47.53604	4
ATCAACG	3055	46.60244	3
CAACGCA	3130	45.485767	5
AACGCAG	3260	43.671917	6
TATCAAC	3600	39.949585	2
CTTAGGT	800	38.764233	3
GGTAATC	345	38.134335	8
TAGGTAT	825	37.589558	5
AGGTATA	845	36.699863	6
ACGCAGA	3905	36.578827	7
TTAGGTA	865	35.85131	4
GTAATCA	435	35.64527	9
CGCAGAG	4120	34.784027	8
GTCTTAG	980	34.050667	1
GCAGAGT	4270	33.342026	9
ACCTAAG	1275	33.17613	1
TCTTAGG	1090	32.7703	2
CTAAGAC	1395	31.661455	3