SRR6576980_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576980_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48489
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	217	0.44752418074202394	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	116	0.23922951597269482	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	73	0.15054960918971313	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	62	0.12786405164057826	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	62	0.12786405164057826	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	56	0.11549011115923198	No Hit
GTAAAAGAATATGAAATATAGCCTTGTCTAAATTCTCTTGCTGACTCTCT	51	0.10517849409144343	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	140	0.0	60.79172	1
TTCTGTA	25	0.0052104346	56.387615	2
TAAGAGT	25	0.0052104346	56.387615	4
GAATATG	35	2.912613E-4	53.70249	7
GTACATG	310	0.0	45.75721	1
TACATGG	310	0.0	45.47388	2
ACATGGG	310	0.0	45.47388	3
GGTATCA	65	2.6192483E-6	43.64534	1
ATGGGGG	65	2.7339665E-6	43.37509	5
CAGAAGG	45	0.001005444	41.768604	7
AGAACAG	45	0.001005444	41.768604	5
TGTAGAT	45	0.001005444	41.768604	3
CGTTGCC	35	4.598316E-6	40.27687	48-49
CATGGGG	170	0.0	38.697384	4
TGGGGGC	50	0.0016878087	37.591743	6
CAACGCA	220	0.0	36.310207	5
ATCAACG	220	0.0	36.310207	3
TGGGGAG	65	1.3954136E-4	36.14591	6
CTCGTTG	40	1.149482E-5	35.24226	46-47
TATCAAC	230	0.0	34.731503	2