SRR6576988_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6576988_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	539615
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2369	0.4390167063554572	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1505	0.27890255089276617	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1488	0.27575215663019004	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	887	0.1643764535826469	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	775	0.14362091491155732	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	653	0.12101220314483475	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	608	0.11267292421448624	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	597	0.11063443380928996	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	576	0.10674277030846065	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	572	0.10600150107020748	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	571	0.10581618376064417	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1295	58.47677	1
GGTATCA	360	49.64875	1
TCAACGC	1585	47.144688	4
CAACGCA	1605	46.557213	5
ATCAACG	1635	45.702953	3
AACGCAG	1685	44.342674	6
TATCAAC	1835	40.981613	2
GGTAATC	190	39.59796	8
ACGCAGA	1975	37.593662	7
CGCAGAG	2060	36.06586	8
ATTATCC	815	33.445316	3
GTGCAAG	275	32.497368	1
GTACATG	2555	32.4003	1
GCAGAGT	2320	32.024	9
GTCTTAG	610	31.614132	1
TACATGG	2620	31.573051	2
ACATGGG	2635	31.390406	3
GTAATCA	240	31.348387	9
AGGGTAA	210	31.328053	6
ACCTAAG	870	30.275827	1