SRR6577007_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6577007_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	614845
Sequences flagged as poor quality	0
Sequence length	100
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	1118	0.18183444607990631	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	972	0.1580886239621368	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	900	0.14637835552049702	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT	875	0.1423122900893721	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	853	0.1387341525099822	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	837	0.13613187063406226	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	813	0.1322284478201823	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA	811	0.13190316258569235	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT	798	0.12978880856150737	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	796	0.12946352332701738	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	782	0.12718652668558741	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	752	0.12230724816823751	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	723	0.11759061226813262	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	710	0.11547625824394765	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	646	0.10506713074026788	No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG	634	0.1031154193333279	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	619	0.10067578007465297	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1145	0.0	59.654057	1
ATCAACG	1440	0.0	45.04424	3
CAACGCA	1480	0.0	43.826824	5
TCAACGC	1535	0.0	42.562687	4
AACGCAG	1565	0.0	41.146122	6
GGTATCA	395	0.0	39.354496	1
GTACTAG	150	0.0	37.684914	1
TATCAAC	1870	0.0	36.697285	2
ACGCAGA	1785	0.0	35.805744	7
GGTAATC	145	1.8189894E-11	35.65141	8
CGCAGAG	1835	0.0	34.830112	8
AAGGGTA	165	1.8189894E-12	34.18377	5
GCAGAGT	1995	0.0	32.27228	9
CTAACGC	105	2.062381E-6	31.335121	3
CCCTAGC	65	0.006150254	28.924728	2
CTCTACG	65	0.0061551444	28.920023	9
GTATAAG	185	3.1832315E-10	28.009054	1
GTGTAAA	85	6.723198E-4	27.709494	1
AGAGTAC	1830	0.0	27.349573	10-11
TAGGCAT	310	0.0	27.291882	5