SRR6577017_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6577017_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	731644
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	3158	0.43163068377516933	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2272	0.3105335381688362	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1760	0.2405541492857182	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1259	0.1720782238356359	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1239	0.16934465395738912	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	929	0.12697432084456375	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	929	0.12697432084456375	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	809	0.11057290157508297	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	801	0.10947947362378424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	320	0.0	64.61644	1
GTATCAA	1485	0.0	53.481136	1
ATCAACG	1740	0.0	44.556976	3
TCAACGC	1740	0.0	44.556976	4
CAACGCA	1815	0.0	42.71578	5
AACGCAG	1865	0.0	41.82253	6
TATCAAC	1910	0.0	40.59672	2
AAAACCG	50	0.0017038729	37.589886	5
GGTAATC	325	0.0	33.25259	8
ACGCAGA	2430	0.0	32.09836	7
CGCAGAG	2450	0.0	31.644547	8
TTAGGTA	700	0.0	30.877403	4
TAGGTAT	675	0.0	30.628798	5
GTGCAAG	435	0.0	30.24887	1
TACATGG	2880	0.0	29.860632	2
GTACATG	2940	0.0	29.570915	1
CTTAGGT	705	0.0	29.325445	3
ACATGGG	2955	0.0	29.25778	3
AAGGGTA	370	0.0	29.208359	5
AGGTATA	715	0.0	28.915297	6