SRR6577029_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6577029_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	822082
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2686	0.3267313966246676	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1860	0.22625480183242058	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1417	0.17236723343899998	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1147	0.13952379446332605	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	996	0.12115579711026393	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	961	0.11689831428008399	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	889	0.10814006388657092	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	881	0.10716692495395835	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	868	0.10558557418846296	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	861	0.10473407762242697	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	860	0.1046124352558504	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	425	0.0	60.83991	1
GTATCAA	1690	0.0	56.192642	1
TCAACGC	1960	0.0	46.99836	4
ATCAACG	2035	0.0	45.266228	3
CAACGCA	2060	0.0	44.48874	5
AACGCAG	2105	0.0	43.53767	6
TATCAAC	2350	0.0	39.210552	2
GTCTTAG	685	0.0	37.747387	1
TAGGTAT	590	0.0	35.04962	5
ACGCAGA	2635	0.0	34.780567	7
CGCAGAG	2675	0.0	34.260483	8
TTAGGTA	605	0.0	34.180626	4
AGGTATA	590	0.0	33.45646	6
CTTAGGT	625	0.0	32.334873	3
ACCTAAG	895	0.0	31.516863	1
CGTAACA	30	0.00416221	31.332235	88-89
GCAGAGT	3065	0.0	30.207754	9
GGTATAG	665	0.0	29.683172	7
CTAAGAC	1045	0.0	29.68317	3
GTACATG	3425	0.0	29.374332	1