SRR6577030_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6577030_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	735195
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2595	0.352967580029788	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1762	0.23966430674854972	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1277	0.17369541414182632	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1057	0.1437713803820755	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	852	0.11588762165139861	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	798	0.10854263154673251	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	763	0.10378198981222668	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	759	0.1032379164711403	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC	736	0.10010949475989363	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1445	0.0	57.98045	1
TCAACGC	1610	0.0	51.661533	4
ATCAACG	1660	0.0	50.105465	3
GGTATCA	375	0.0	48.951134	1
CAACGCA	1705	0.0	48.50742	5
AACGCAG	1755	0.0	46.857685	6
TATCAAC	1930	0.0	43.107616	2
ACGCAGA	2120	0.0	38.56855	7
CGCAGAG	2150	0.0	38.272373	8
GCAGAGT	2425	0.0	34.12611	9
GTACATG	2855	0.0	32.148293	1
TACATGG	2890	0.0	32.04103	2
ACCTAAG	875	0.0	30.123775	1
ACATGGG	3015	0.0	30.080837	3
CTAAGAC	970	0.0	29.551397	3
TATAGGG	80	4.776635E-4	29.37772	2
AGAGTAC	2140	0.0	28.234182	10-11
GGTACCT	340	0.0	27.659027	8
ATAGTAC	85	6.820888E-4	27.642097	3
TAAGACA	1160	0.0	27.141682	4